Phylogenetic analyses of the matrix and non-structural genes of equine influenza viruses
Identifieur interne : 001A93 ( Main/Exploration ); précédent : 001A92; suivant : 001A94Phylogenetic analyses of the matrix and non-structural genes of equine influenza viruses
Auteurs : S. Lindstrom [Japon] ; A. Endo [Japon] ; S. Sugita [Japon] ; M. Pecoraro [Argentine] ; Y. Hiromoto [Japon] ; M. Kamada [Japon] ; T. Takahashi [Japon] ; K. Nerome [Japon]Source :
- Archives of Virology [ 0304-8608 ] ; 1998-07-01.
Abstract
Summary: Matrix (M) and nonstructural (NS) genes of thirteen equine H3N8 and H7N7 influenza viruses were sequenced and analyzed from an evolutionary point of view. The M and NS genes of H3N8 viruses isolated between 1989 and 1993 evolved into two minor branch clusters, including isolates from Europe and the American continent, respectively. It was noteworthy to reveal that the nucleotide sequences of the M and NS genes of an earlier American strain showed highest homology to those of recent European viruses. “Frozen evolution” was observed in the M and NS genes of A/eq/LaPlata/1/88. It was also evident that the NS gene of an H7N7 virus from 1977 was very similar to that of a 1979-H3N 8 virus, while the M gene was closest phylogenetically to that of the earliest H7N7 virus isolated in 1956. Furthermore, the M2 protein of A/eq/Newmarket/1/77 virus contained a carboxyl terminal deletion of three amino acids. The evolutionary rates of the M and NS genes of H3N8 equine influenza viruses were estimated to be 5.4 × 10−4 and 5.1 × 10−4 substitutions per site per year, respectively, which were slower than those of human viruses.
Url:
DOI: 10.1007/s007050050400
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream Istex, to step Corpus: 001092
- to stream Istex, to step Curation: 001092
- to stream Istex, to step Checkpoint: 000888
- to stream Main, to step Merge: 001B48
- to stream Main, to step Curation: 001A93
Le document en format XML
<record><TEI wicri:istexFullTextTei="biblStruct"><teiHeader><fileDesc><titleStmt><title xml:lang="en">Phylogenetic analyses of the matrix and non-structural genes of equine influenza viruses</title><author><name sortKey="Lindstrom, S" sort="Lindstrom, S" uniqKey="Lindstrom S" first="S." last="Lindstrom">S. Lindstrom</name></author><author><name sortKey="Endo, A" sort="Endo, A" uniqKey="Endo A" first="A." last="Endo">A. Endo</name></author><author><name sortKey="Sugita, S" sort="Sugita, S" uniqKey="Sugita S" first="S." last="Sugita">S. Sugita</name></author><author><name sortKey="Pecoraro, M" sort="Pecoraro, M" uniqKey="Pecoraro M" first="M." last="Pecoraro">M. Pecoraro</name></author><author><name sortKey="Hiromoto, Y" sort="Hiromoto, Y" uniqKey="Hiromoto Y" first="Y." last="Hiromoto">Y. Hiromoto</name></author><author><name sortKey="Kamada, M" sort="Kamada, M" uniqKey="Kamada M" first="M." last="Kamada">M. Kamada</name></author><author><name sortKey="Takahashi, T" sort="Takahashi, T" uniqKey="Takahashi T" first="T." last="Takahashi">T. Takahashi</name></author><author><name sortKey="Nerome, K" sort="Nerome, K" uniqKey="Nerome K" first="K." last="Nerome">K. Nerome</name></author></titleStmt><publicationStmt><idno type="wicri:source">ISTEX</idno><idno type="RBID">ISTEX:C4B0489E0C08CAD6DE0CB6593AC102B31C296129</idno><date when="1998" year="1998">1998</date><idno type="doi">10.1007/s007050050400</idno><idno type="url">https://api.istex.fr/ark:/67375/VQC-6GF9DNBQ-3/fulltext.pdf</idno><idno type="wicri:Area/Istex/Corpus">001092</idno><idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Corpus" wicri:corpus="ISTEX">001092</idno><idno type="wicri:Area/Istex/Curation">001092</idno><idno type="wicri:Area/Istex/Checkpoint">000888</idno><idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Checkpoint">000888</idno><idno type="wicri:doubleKey">0304-8608:1998:Lindstrom S:phylogenetic:analyses:of</idno><idno type="wicri:Area/Main/Merge">001B48</idno><idno type="wicri:Area/Main/Curation">001A93</idno><idno type="wicri:Area/Main/Exploration">001A93</idno></publicationStmt><sourceDesc><biblStruct><analytic><title level="a" type="main" xml:lang="en">Phylogenetic analyses of the matrix and non-structural genes of equine influenza viruses</title><author><name sortKey="Lindstrom, S" sort="Lindstrom, S" uniqKey="Lindstrom S" first="S." last="Lindstrom">S. Lindstrom</name><affiliation wicri:level="1"><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Virology I, National Institute of Infectious Diseases, Tokyo, Japan</wicri:regionArea><wicri:noRegion>Japan</wicri:noRegion></affiliation></author><author><name sortKey="Endo, A" sort="Endo, A" uniqKey="Endo A" first="A." last="Endo">A. Endo</name><affiliation wicri:level="1"><country xml:lang="fr">Japon</country><wicri:regionArea>Daiichi Pharmaceutical Co. Ltd., Tokyo, Japan</wicri:regionArea><wicri:noRegion>Japan</wicri:noRegion></affiliation></author><author><name sortKey="Sugita, S" sort="Sugita, S" uniqKey="Sugita S" first="S." last="Sugita">S. Sugita</name><affiliation wicri:level="1"><country xml:lang="fr">Japon</country><wicri:regionArea>Epizootic Research Station, Equine Research Institute, Japan Racing Association, Tochigi, Japan</wicri:regionArea><wicri:noRegion>Japan</wicri:noRegion></affiliation></author><author><name sortKey="Pecoraro, M" sort="Pecoraro, M" uniqKey="Pecoraro M" first="M." last="Pecoraro">M. Pecoraro</name><affiliation wicri:level="1"><country xml:lang="fr">Argentine</country><wicri:regionArea>La Plata Veterinary Faculty, The University of La Plata, Buenos Aires, Argentina</wicri:regionArea><wicri:noRegion>Argentina</wicri:noRegion></affiliation></author><author><name sortKey="Hiromoto, Y" sort="Hiromoto, Y" uniqKey="Hiromoto Y" first="Y." last="Hiromoto">Y. Hiromoto</name><affiliation wicri:level="1"><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Virology I, National Institute of Infectious Diseases, Tokyo, Japan</wicri:regionArea><wicri:noRegion>Japan</wicri:noRegion></affiliation></author><author><name sortKey="Kamada, M" sort="Kamada, M" uniqKey="Kamada M" first="M." last="Kamada">M. Kamada</name><affiliation wicri:level="1"><country xml:lang="fr">Japon</country><wicri:regionArea>Epizootic Research Station, Equine Research Institute, Japan Racing Association, Tochigi, Japan</wicri:regionArea><wicri:noRegion>Japan</wicri:noRegion></affiliation></author><author><name sortKey="Takahashi, T" sort="Takahashi, T" uniqKey="Takahashi T" first="T." last="Takahashi">T. Takahashi</name><affiliation wicri:level="1"><country xml:lang="fr">Japon</country><wicri:regionArea>Hoshi University, Tokyo, Japan</wicri:regionArea><wicri:noRegion>Japan</wicri:noRegion></affiliation></author><author><name sortKey="Nerome, K" sort="Nerome, K" uniqKey="Nerome K" first="K." last="Nerome">K. Nerome</name><affiliation wicri:level="1"><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Virology I, National Institute of Infectious Diseases, Tokyo, Japan</wicri:regionArea><wicri:noRegion>Japan</wicri:noRegion></affiliation></author></analytic><monogr></monogr><series><title level="j">Archives of Virology</title><title level="j" type="abbrev">Arch. Virol.</title><idno type="ISSN">0304-8608</idno><idno type="eISSN">1432-8798</idno><imprint><publisher>Springer-Verlag</publisher><pubPlace>Vienna</pubPlace><date type="published" when="1998-07-01">1998-07-01</date><biblScope unit="volume">143</biblScope><biblScope unit="issue">8</biblScope><biblScope unit="page" from="1585">1585</biblScope><biblScope unit="page" to="1598">1598</biblScope></imprint><idno type="ISSN">0304-8608</idno></series></biblStruct></sourceDesc><seriesStmt><idno type="ISSN">0304-8608</idno></seriesStmt></fileDesc><profileDesc><textClass></textClass><langUsage><language ident="en">en</language></langUsage></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Summary: Matrix (M) and nonstructural (NS) genes of thirteen equine H3N8 and H7N7 influenza viruses were sequenced and analyzed from an evolutionary point of view. The M and NS genes of H3N8 viruses isolated between 1989 and 1993 evolved into two minor branch clusters, including isolates from Europe and the American continent, respectively. It was noteworthy to reveal that the nucleotide sequences of the M and NS genes of an earlier American strain showed highest homology to those of recent European viruses. “Frozen evolution” was observed in the M and NS genes of A/eq/LaPlata/1/88. It was also evident that the NS gene of an H7N7 virus from 1977 was very similar to that of a 1979-H3N 8 virus, while the M gene was closest phylogenetically to that of the earliest H7N7 virus isolated in 1956. Furthermore, the M2 protein of A/eq/Newmarket/1/77 virus contained a carboxyl terminal deletion of three amino acids. The evolutionary rates of the M and NS genes of H3N8 equine influenza viruses were estimated to be 5.4 × 10−4 and 5.1 × 10−4 substitutions per site per year, respectively, which were slower than those of human viruses.</div></front></TEI><affiliations><list><country><li>Argentine</li><li>Japon</li></country></list><tree><country name="Japon"><noRegion><name sortKey="Lindstrom, S" sort="Lindstrom, S" uniqKey="Lindstrom S" first="S." last="Lindstrom">S. Lindstrom</name></noRegion><name sortKey="Endo, A" sort="Endo, A" uniqKey="Endo A" first="A." last="Endo">A. Endo</name><name sortKey="Hiromoto, Y" sort="Hiromoto, Y" uniqKey="Hiromoto Y" first="Y." last="Hiromoto">Y. Hiromoto</name><name sortKey="Kamada, M" sort="Kamada, M" uniqKey="Kamada M" first="M." last="Kamada">M. Kamada</name><name sortKey="Nerome, K" sort="Nerome, K" uniqKey="Nerome K" first="K." last="Nerome">K. Nerome</name><name sortKey="Sugita, S" sort="Sugita, S" uniqKey="Sugita S" first="S." last="Sugita">S. Sugita</name><name sortKey="Takahashi, T" sort="Takahashi, T" uniqKey="Takahashi T" first="T." last="Takahashi">T. Takahashi</name></country><country name="Argentine"><noRegion><name sortKey="Pecoraro, M" sort="Pecoraro, M" uniqKey="Pecoraro M" first="M." last="Pecoraro">M. Pecoraro</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/H2N2V1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001A93 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 001A93 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Sante
|area= H2N2V1
|flux= Main
|étape= Exploration
|type= RBID
|clé= ISTEX:C4B0489E0C08CAD6DE0CB6593AC102B31C296129
|texte= Phylogenetic analyses of the matrix and non-structural genes of equine influenza viruses
}}
| This area was generated with Dilib version V0.6.33. |  |